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Jianan Chen

Loss odyssey in medical image segmentation
2021 · Jun Ma, Jianan Chen, et al. · Medical Image Analysis · 706
Toward data‐efficient learning: A benchmark for COVID‐19 CT lung and infection segmentation
2020 · Jun Ma, Yixin Wang, et al. · Medical Physics · 369
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How Distance Transform Maps Boost Segmentation CNNs: An Empirical Study
2020 · Jun Ma, Wei Zhan, et al. · Medical Imaging with Deep Learning · 71
Potential of Raman spectroscopy in facilitating pharmaceutical formulations development – An AI perspective
2021 · Ming Gao, Sibo Liu, et al. · International Journal of Pharmaceutics · 27
Unsupervised Clustering of Quantitative Imaging Phenotypes Using Autoencoder and Gaussian Mixture Model
2019 · Jianan Chen, Laurent Milot, et al. · Lecture notes in computer science · 21
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AMINN: Autoencoder-Based Multiple Instance Neural Network Improves Outcome Prediction in Multifocal Liver Metastases
2021 · Jianan Chen, Helen M. C. Cheung, et al. · Lecture notes in computer science · 16
Targeting tumour-associated macrophages in hodgkin lymphoma using engineered extracellular matrix-mimicking cryogels
2023 · Laura C. Bahlmann, Chang Xue, et al. · Biomaterials · 15
Multi-layer Domain Adaptation for Deep Convolutional Networks
2019 · Ozan Ciga, Jianan Chen, et al. · Lecture notes in computer science · 12
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Impact of tissue staining and scanner variation on the performance of pathology foundation models: a study of sarcomas and their mimics
2026 · Binghao Chai, Jianan Chen, et al. · The Journal of Pathology Clinical Research · 9
A radiomic biomarker for prognosis of resected colorectal cancer liver metastases generalizes across MRI contrast agents
2023 · Jianan Chen, Helen M. C. Cheung, et al. · Frontiers in Oncology · 9
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NnUNet with Region-based Training and Loss Ensembles for Brain Tumor Segmentation
2022 · Jun Ma, Jianan Chen · Lecture notes in computer science · 8
Profiling the genomic landscape and evolutionary history of polyploid giant cancer cells in undifferentiated pleomorphic sarcomas
2025 · Amy L. Bowes, Sara Waise, et al. · Cancer Letters · 7
Head and Neck Tumor Segmentation with 3D UNet and Survival Prediction with Multiple Instance Neural Network
2023 · Jianan Chen, Anne L. Martel · Lecture notes in computer science · 7
Detecting Noisy Labels with Repeated Cross-Validations
2024 · Jianan Chen, Vishwesh Ramanathan, et al. · Lecture notes in computer science · 6
Teaching Pathology Foundation Models to Accurately Predict Gene Expression with Parameter Efficient Knowledge Transfer
2025 · Shi Pan, Jianan Chen, et al. · Lecture notes in computer science · 5
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Cross-Validation Is All You Need: A Statistical Approach To Label Noise Estimation
2023 · Chen, Jianan, Ramanathan, Vishwesh, et al. · arXiv (Cornell University) · 5
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General stain deconvolution of histopathology images with physics-guided deep learning
2022 · Jianan Chen, Lydia Y. Liu, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 3
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The MICCAI Hackathon on reproducibility, diversity, and selection of papers at the MICCAI conference
2021 · Balsiger, Fabian, Jungo, Alain, et al. · arXiv (Cornell University) · 3
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AMINN: Autoencoder-based Multiple Instance Neural Network Improves Outcome Prediction of Multifocal Liver Metastases
2020 · Chen, Jianan, Cheung, Helen M. C., et al. · arXiv (Cornell University) · 3
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Mental Fatigue Classification with High-Density Diffuse Optical Tomography: A Feasibility Study
2024 · Jianan Chen, Yunjia Xia, et al. · Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) · 2
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Physics-Guided Deep Image Prior Network for General Zero-Shot Stain Deconvolution
2025 · Jianan Chen, Lydia Y. Liu, et al. · Lecture notes in computer science · 1
Integrated image-processing and transcriptomic analysis of cancer-associated fibroblasts (CAFs) in breast cancer subtypes
2023 · Alison M. Cheung, Hassan Besher, et al. · SPIE Medical Imaging: Digital and Computational Pathology · 1
Metastatic Cancer Outcome Prediction with Injective Multiple Instance Pooling
2022 · Chen, Jianan, Martel, Anne L. · arXiv (Cornell University) · 1
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Improving computational tumor ploidy estimation in complex cancer genomes through flow-cytometry-guided calibration
2026 · Thomas Butters, Dahmane Oukrif, et al. · Cell Reports Methods
An Automated Radiomics Framework for Postoperative Survival Prediction in Colorectal Liver Metastases using Preoperative MRI
2026 · Alberb, Muhammad, Chen, Jianan, et al. · arXiv (Cornell University)
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Works count: 30
Citation count: 1,307
H-index: 9
I10-index: 8
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