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PHY-1427654

Funded outputs count: 67
Funder award ID: PHY-1427654
OpenAlex ID: G1047773206
Tumor budding as a potential prognostic marker in determining the behavior of primary liver cancers
2023 · Betul Unal, Mennan Yigitcan Celik, et al. · World Journal of Hepatology · 4
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Delineating the Tnt1 Insertion Landscape of the Model Legume Medicago truncatula cv. R108 at the Hi-C Resolution Using a Chromosome-Length Genome Assembly
2021 · Parwinder Kaur, Christopher Lui, et al. · International Journal of Molecular Sciences · 28
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Predicting Relapse in Patients With Triple Negative Breast Cancer (TNBC) Using a Deep-Learning Approach
2020 · Guangyuan Yu, Xuefei Li, et al. · Frontiers in Physiology · 13
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Gene Circuit Explorer (GeneEx): an interactive web-app for visualizing, simulating and analyzing gene regulatory circuits
2020 · Vivek Kohar, Danya Gordin, et al. · Bioinformatics · 4
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Enhancing intracellular accumulation and target engagement of PROTACs with reversible covalent chemistry
2020 · Wen-Hao Guo, Xiaoli Qi, et al. · Nature Communications · 209
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Drug-Tolerant Idling Melanoma Cells Exhibit Theory-Predicted Metabolic Low-Low Phenotype
2020 · Dongya Jia, B. Bishal Paudel, et al. · Frontiers in Oncology · 23
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Decoding the mechanisms underlying cell-fate decision-making during stem cell differentiation by random circuit perturbation
2020 · Bin Huang, Mingyang Lu, et al. · Journal of The Royal Society Interface · 29
Large DNA Methylation Nadirs Anchor Chromatin Loops Maintaining Hematopoietic Stem Cell Identity
2020 · Xiaotian Zhang, Mira Jeong, et al. · Molecular Cell · 96
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Comparative Study of Transcriptomics-Based Scoring Metrics for the Epithelial-Hybrid-Mesenchymal Spectrum
2020 · Priyanka Chakraborty, Jason T George, et al. · Frontiers in Bioengineering and Biotechnology · 106
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ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL
2020 · Gordana Wutz, Rene Ladurner, et al. · eLife · 178
Mesoscopic Liquid Clusters Represent a Distinct Condensate of Mutant p53
2020 · David S. Yang, Arash Saeedi, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 5
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Sustained Coevolution in a Stochastic Model of Cancer–Immune Interaction
2019 · Jason T. George, Herbert Levine · Cancer Research · 24
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Multiple Binding Configurations of Fis Protein Pairs on DNA: Facilitated Dissociation versus Cooperative Dissociation
2019 · Min-Yeh Tsai, Weihua Zheng, et al. · Journal of the American Chemical Society · 17
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A possible role for epigenetic feedback regulation in the dynamics of the epithelial–mesenchymal transition (EMT)
2019 · Wen Jia, Abhijeet Deshmukh, et al. · Physical Biology · 76
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Recent Advances in Computational Protocols Addressing Intrinsically Disordered Proteins
2019 · Supriyo Bhattacharya, Xingcheng Lin · Biomolecules · 68
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Faculty Opinions recommendation of Static and Dynamic DNA Loops form AP-1-Bound Activation Hubs during Macrophage Development.
2019 · Amy Kenter · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
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E-Cadherin Represses Anchorage-Independent Growth in Sarcomas through Both Signaling and Mechanical Mechanisms
2019 · Mohit Kumar Jolly, Kathryn E. Ware, et al. · Molecular Cancer Research · 43
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Cofilin-Mediated Actin Stress Response Is Maladaptive in Heat-Stressed Embryos
2019 · Lauren Figard, Liuliu Zheng, et al. · Cell Reports · 28
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Structural and Dynamical Order of a Disordered Protein: Molecular Insights into Conformational Switching of PAGE4 at the Systems Level
2019 · Xingcheng Lin, Prakash Kulkarni, et al. · Biomolecules · 23
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Infiltration of CD8 + T cells into tumor cell clusters in triple-negative breast cancer
2019 · Xuefei Li, Tina Gruosso, et al. · Proceedings of the National Academy of Sciences · 134
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Computational Modeling of the Crosstalk Between Macrophage Polarization and Tumor Cell Plasticity in the Tumor Microenvironment
2019 · Xuefei Li, Mohit Kumar Jolly, et al. · Frontiers in Oncology · 73
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Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling
2018 · Guy Nir, Irene Farabella, et al. · PLoS Genetics · 259
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Testing the gene expression classification of the EMT spectrum
2018 · Dongya Jia, Jason T George, et al. · Physical Biology · 41
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The Hi-Culfite assay reveals relationships between chromatin contacts and DNA methylation state
2018 · Elena K. Stamenova, Neva C. Durand, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2
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The anti-apoptotic proteins NAF-1 and iASPP interact to drive apoptosis in cancer cells
2018 · Anat Iosub-Amir, Fang Bai, et al. · Chemical Science · 13
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