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872539

Funded outputs count: 14
Funder award ID: 872539
OpenAlex ID: G2585677828
Pattern matching with Elastic-Degenerate strings and Elastic-Founder graphs
2026 · Rocco Ascone, Giulia Bernardini, et al. · Algorithms for Molecular Biology · 1
Text indexing for long patterns using locally consistent anchors
2025 · Lorraine A. K. Ayad, Grigorios Loukides, et al. · The VLDB Journal · 7
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Insights into non-informative results from non-invasive prenatal screening through gestational age, maternal BMI, and age analyses
2024 · Juraj Gazdarica, Natalia Forgacova, et al. · PLoS ONE · 20
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Petascale Homology Search for Structure Prediction
2023 · Sewon Lee, Gyuri Kim, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 14
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Combination of expert guidelines-based and machine learning-based approaches leads to superior accuracy of automated prediction of clinical effect of copy number variations
2023 · Tomáš Sládeček, Michaela Gažiová, et al. · Scientific Reports · 7
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Accurate and fast clade assignment via deep learning and frequency chaos game representation
2022 · Jorge Avila Cartes, Santosh Anand, et al. · GigaScience · 21
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VirPool: model-based estimation of SARS-CoV-2 variant proportions in wastewater samples
2022 · Askar Gafurov, Andrej Baláž, et al. · BMC Bioinformatics · 12
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StrainXpress: strain aware metagenome assembly from short reads
2022 · Xiongbin Kang, Xiao Luo, et al. · Nucleic Acids Research · 9
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Automated prediction of the clinical impact of structural copy number variations
2022 · M. Gažiová, T. Sládeček, et al. · Scientific Reports · 16
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Minimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer
2021 · Barış Ekim, Bonnie Berger, et al. · Cell Systems · 133
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Repurposing non‑invasive prenatal testing data: Population study of single nucleotide variants associated with colorectal cancer and Lynch syndrome
2021 · Natalia Forgacova, Juraj Gazdarica, et al. · Oncology Letters · 4
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DNA copy number variation: Main characteristics, evolutionary significance, and pathological aspects
2021 · Ondrej Pös, Jan Radvanszky, et al. · Biomedical Journal · 303
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PHERI - Phage Host Exploration pipeline
2020 · Andrej Baláž, Michal Kajsík, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 9
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