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Alex's Lemonade Stand Foundation

Alternate name: Alex's Lemonade Stand
ROR: 038ja4880
OpenAlex ID: I4210126766
Transparency and reproducibility in artificial intelligence
2020 · Benjamin Haibe-Kains, George Alexandru Adam, et al. · Nature · 521
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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
2019 · Naihui Zhou, Yuxiang Jiang, et al. · Genome biology · 445
Constructing knowledge graphs and their biomedical applications
2020 · David N. Nicholson, Casey S. Greene · Computational and Structural Biotechnology Journal · 299
Enter the Matrix: Factorization Uncovers Knowledge from Omics
2018 · Genevieve L. Stein-O’Brien, Raman Arora, et al. · Trends in Genetics · 230
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Immune landscapes associated with different glioblastoma molecular subtypes
2019 · Maria Martinez-Lage, Timothy M. Lynch, et al. · Acta Neuropathologica Communications · 211
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Genomic Profiling of Childhood Tumor Patient-Derived Xenograft Models to Enable Rational Clinical Trial Design
2019 · Jo Lynne Rokita, Komal S. Rathi, et al. · Cell Reports · 173
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Recommendations to enhance rigor and reproducibility in biomedical research
2020 · Jaqueline J Brito, Jun Li, et al. · GigaScience · 153
Responsible, practical genomic data sharing that accelerates research
2020 · James Brian Byrd, Anna C. Greene, et al. · Nature Reviews Genetics · 147
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Genome-wide association study implicates novel loci and reveals candidate effector genes for longitudinal pediatric bone accrual
2021 · Diana L. Cousminer, Yadav Wagley, et al. · Genome biology · 144
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Dietary Supplements and Nutraceuticals under Investigation for COVID-19 Prevention and Treatment
2021 · Ronan Lordan, Halie M. Rando, et al. · mSystems · 126
Machine learning in rare disease
2023 · Jineta Banerjee, Jaclyn N. Taroni, et al. · Nature Methods · 121
MultiPLIER: A Transfer Learning Framework for Transcriptomics Reveals Systemic Features of Rare Disease
2019 · Jaclyn N. Taroni, Peter C. Grayson, et al. · Cell Systems · 118
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Compressing gene expression data using multiple latent space dimensionalities learns complementary biological representations
2020 · Gregory P. Way, Michael Zietz, et al. · Genome biology · 79
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Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths
2023 · Mariela Cortés-López, Paulina Chamely, et al. · Cell stem cell · 65
OpenPBTA: The Open Pediatric Brain Tumor Atlas
2023 · Joshua A. Shapiro, Krutika S. Gaonkar, et al. · Cell Genomics · 64
Communication During Palliative Care and End of Life
2016 · Kathleen E. Montgomery, Kathleen J. Sawin, et al. · Cancer Nursing · 62
The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution
2019 · Deanne M. Taylor, Bruce J. Aronow, et al. · Developmental Cell · 59
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The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
2019 · Naihui Zhou, Yuxiang Jiang, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 58
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Impacts of COVID‐19 on caregivers of childhood cancer survivors
2021 · Courtney E. Wimberly, Lisa Towry, et al. · Pediatric Blood & Cancer · 57
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Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously
2023 · Steven M. Foltz, Casey S. Greene, et al. · Communications Biology · 54
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Macrophages in SHH subgroup medulloblastoma display dynamic heterogeneity that varies with treatment modality
2021 · Mai T. Dang, Michael V. Gonzalez, et al. · Cell Reports · 45
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Incorporating biological structure into machine learning models in biomedicine
2020 · Jake Crawford, Casey S Greene · Current Opinion in Biotechnology · 41
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Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure
2021 · Rando, Halie M., MacLean, Adam L., et al. · arXiv (Cornell University) · 38
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EWS::FLI1 and HOXD13 Control Tumor Cell Plasticity in Ewing Sarcoma
2022 · April A. Apfelbaum, Feinan Wu, et al. · Clinical Cancer Research · 29
Integrated phosphoproteomics and transcriptional classifiers reveal hidden RAS signaling dynamics in multiple myeloma
2019 · Yu-Hsiu T. Lin, Gregory P. Way, et al. · Blood Advances · 25
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Works count: 119
Citation count: 6,535
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