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Keyword

codon usage

Description: The pattern of synonymous codons used to encode amino acids in genes, studied in molecular biology, genomics, and evolutionary genetics.
Wikidata ID: wiki/Q1106472
OpenAlex ID: keywords/codon-usage
The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications
1987 · Paul M. Sharp, Wen-Hsiung Li · Nucleic Acids Research · 3,981
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The origin of the genetic code
1968 · F.H.C. Crick · Journal of Molecular Biology · 2,317
Coronavirus Disease 2019–COVID-19
2020 · Kuldeep Dhama, Sharun Khan, et al. · Clinical Microbiology Reviews · 1,876
Codon usage and tRNA content in unicellular and multicellular organisms.
1985 · T Ikemura · Molecular Biology and Evolution · 1,705
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Codon selection in yeast.
1982 · J L Bennetzen, B D Hall · Journal of Biological Chemistry · 1,588
The mitochondrial DNA molecule ofDrosophila yakuba: Nucleotide sequence, gene organization, and genetic code
1985 · Douglas O. Clary, David R. Wolstenholme · Journal of Molecular Evolution · 1,520
WWW-query: An on-line retrieval system for biological sequence banks
1996 · G. Perrière, M. Gouy · Biochimie · 1,481
Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system
1981 · Toshimichi Ikemura · Journal of Molecular Biology · 1,418
Strategies for achieving high-level expression of genes in Escherichia coli
1996 · S C Makrides · Microbiological Reviews · 1,276
Complete Genome Sequence of Enterohemorrhagic Eschelichia coli O157:H7 and Genomic Comparison with a Laboratory Strain K-12
2001 · T. Hayashi · DNA Research · 1,273
Codon usage tabulated from international DNA sequence databases: status for the year 2000
2000 · Y. Nakamura · Nucleic Acids Research · 1,260
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Codon usage in bacteria: correlation with gene expressivity
1982 · M. Gouy, C. Gautier · Nucleic Acids Research · 1,250
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Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes
1986 · Paul M. Sharp, Therese M.F. Tuohy, et al. · Nucleic Acids Research · 1,201
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Nucleotide sequence of bacteriophage λ DNA
1982 · F. Sanger, A.R. Coulson, et al. · Journal of Molecular Biology · 1,174
MEGA: Molecular Evolutionary Genetics Analysis software for microcomputers
1994 · Sudhir Kumar, Koichiro Tamura, et al. · Computer applications in the biosciences · 1,163
Selection on Codon Bias
2008 · Ruth Hershberg, Dmitri A. Petrov · Annual Review of Genetics · 1,072
Mistranslation-Induced Protein Misfolding as a Dominant Constraint on Coding-Sequence Evolution
2008 · D. Allan Drummond, Claus O. Wilke · Cell · 1,055
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Improving cytidine and adenine base editors by expression optimization and ancestral reconstruction
2018 · Luke W Koblan, Jordan L Doman, et al. · Nature Biotechnology · 942
Codon catalog usage is a genome strategy modulated for gene expressivity
1981 · R. Grantham, C. Gautier, et al. · Nucleic Acids Research · 939
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Recognition of protein coding regions in DNA sequences
1982 · James W. Fickett · Nucleic Acids Research · 904
The Mosaic Genome of Warm-Blooded Vertebrates
1985 · Giorgio Bernardi, Birgitta Olofsson, et al. · Science · 876
Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes
1981 · Toshimichi Ikemura · Journal of Molecular Biology · 874
Genomically Recoded Organisms Expand Biological Functions
2013 · Marc J. Lajoie, Alexis J. Rovner, et al. · Science · 868
FragGeneScan: predicting genes in short and error-prone reads
2010 · Mina Rho, Haixu Tang, et al. · Nucleic Acids Research · 848
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Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis , Drosophila , and Arabidopsis
1999 · Laurent Duret, Dominique Mouchiroud · Proceedings of the National Academy of Sciences · 815
Works count: 7,194
Citation count: 195,500
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