Keyword

dipeptide composition

Description: Dipeptide composition is a protein-sequence feature that records the frequencies of adjacent amino acid pairs, used in computational biology and classification.

Primary topic: Machine Learning in Bioinformatics (79%)

OpenAlex ID: keywords/dipeptide-composition

In Silico Approach for Predicting Toxicity of Peptides and Proteins

2013 · Sudheer Gupta, Pallavi Kapoor, et al. · PLoS ONE · 2,020

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Correlation between stability of a protein and its dipeptide composition: a novel approach for predicting in vivo stability of a protein from its primary sequence

1990 · Kunchur Guruprasad, B.V.Bhasker Reddy, et al. · Protein Engineering Design and Selection · 1,347

AlgPred: prediction of allergenic proteins and mapping of IgE epitopes

2006 · S. Saha, G. P. S. Raghava · Nucleic Acids Research · 754

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propy: a tool to generate various modes of Chou’s PseAAC

2013 · Dong-Sheng Cao, Qing-Song Xu, et al. · Bioinformatics · 477

Improved Method for Linear B-Cell Epitope Prediction Using Antigen’s Primary Sequence

2013 · Harinder Singh, Hifzur Rahman Ansari, et al. · PLoS ONE · 384

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Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition

2004 · Manoj Bhasin, Gajendra P.S. Raghava · Journal of Biological Chemistry · 354

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AntiCP 2.0: an updated model for predicting anticancer peptides

2020 · Piyush Agrawal, Dhruv Bhagat, et al. · Briefings in Bioinformatics · 345

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VirulentPred: a SVM based prediction method for virulent proteins in bacterial pathogens

2008 · Aarti Garg, Dinesh Gupta · BMC Bioinformatics · 338

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In silico approaches for designing highly effective cell penetrating peptides

2013 · Ankur Gautam, Kumardeep Chaudhary, et al. · Journal of Translational Medicine · 323

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Computer-aided designing of immunosuppressive peptides based on IL-10 inducing potential

2017 · Gandharva Nagpal, Salman Sadullah Usmani, et al. · Scientific Reports · 317

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ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST

2004 · M. Bhasin, G. P. S. Raghava · Nucleic Acids Research · 310

PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence

2006 · Z. R. Li, H. H. Lin, et al. · Nucleic Acids Research · 297

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Identification of DNA-binding proteins using support vector machines and evolutionary profiles

2007 · Manish Kumar, Michael M Gromiha, et al. · BMC Bioinformatics · 278

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MLACP: machine-learning-based prediction of anticancer peptides

2017 · Balachandran Manavalan, Shaherin Basith, et al. · Oncotarget · 276

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PSLpred: prediction of subcellular localization of bacterial proteins

2005 · M. Bhasin, A. Garg, et al. · Computer applications in the biosciences · 261

Applicability of Instability Index for In vitro Protein Stability Prediction

2019 · Dilani G. Gamage, Ajith Gunaratne, et al. · Protein and Peptide Letters · 241

Prediction of protein subcellular locations using fuzzy k-NN method

2003 · Ying Huang, Yanda Li · Bioinformatics · 238

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AIPpred: Sequence-Based Prediction of Anti-inflammatory Peptides Using Random Forest

2018 · Balachandran Manavalan, Tae H. Shin, et al. · Frontiers in Pharmacology · 235

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Support Vector Machine-based Method for Subcellular Localization of Human Proteins Using Amino Acid Compositions, Their Order, and Similarity Search

2005 · Aarti Garg, Manoj Bhasin, et al. · Journal of Biological Chemistry · 232

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Identification of bacteriophage virion proteins by the ANOVA feature selection and analysis

2014 · Hui Ding, Peng-Mian Feng, et al. · Molecular BioSystems · 200

PVP-SVM: Sequence-Based Prediction of Phage Virion Proteins Using a Support Vector Machine

2018 · Balachandran Manavalan, Tae H. Shin, et al. · Frontiers in Microbiology · 195

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HBPred: a tool to identify growth hormone-binding proteins

2018 · Hua Tang, Ya-Wei Zhao, et al. · International Journal of Biological Sciences · 178

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Predicting DNA-binding proteins: approached from Chou’s pseudo amino acid composition and other specific sequence features

2007 · Y. Fang, Y. Guo, et al. · Amino Acids · 175

Naïve Bayes Classifier with Feature Selection to Identify Phage Virion Proteins

2013 · Peng-Mian Feng, Hui Ding, et al. · Computational and Mathematical Methods in Medicine · 167

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GPCRpred: an SVM-based method for prediction of families and subfamilies of G-protein coupled receptors

2004 · M. Bhasin, G. P. S. Raghava · Nucleic Acids Research · 166

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Works count: 565

Citation count: 20,820