Keyword

DNA sequence encoding

Description: The conversion of DNA nucleotide sequences into numerical or symbolic representations for computational analysis and machine learning.

Primary topic: Fractal and DNA sequence analysis (21%)

OpenAlex ID: keywords/dna-sequence-encoding

Emerging Approaches to DNA Data Storage: Challenges and Prospects

2022 · Andrea Doricchi, Casey M. Platnich, et al. · ACS Nano · 233

i6mA-Pred: identifying DNA N6-methyladenine sites in the rice genome

2019 · Wei Chen, Hao Lv, et al. · Bioinformatics · 212

An image encryption scheme combining chaos with cycle operation for DNA sequences

2016 · Ting Hu, Ye Liu, et al. · Nonlinear Dynamics · 167

DeepTorrent: a deep learning-based approach for predicting DNA N4-methylcytosine sites

2020 · Quanzhong Liu, Jinxiang Chen, et al. · Briefings in Bioinformatics · 123

Numerical encoding of DNA sequences by chaos game representation with application in similarity comparison

2016 · Tung Hoang, Changchuan Yin, et al. · Genomics · 98

i4mC-ROSE, a bioinformatics tool for the identification of DNA N4-methylcytosine sites in the Rosaceae genome

2019 · Md. Mehedi Hasan, Balachandran Manavalan, et al. · International Journal of Biological Macromolecules · 85

A fast image encryption algorithm based on parallel compressive sensing and DNA sequence

2021 · Deyun Wei, Mingjie Jiang · Optik · 82

Survey on encoding schemes for genomic data representation and feature learning—from signal processing to machine learning

2018 · Ning Yu, Zhihua Li, et al. · Big Data Mining and Analytics · 80

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Evaluation of convolutionary neural networks modeling of DNA sequences using ordinal versus one-hot encoding method

2017 · Allen Chieng Hoon Choong, Nung Kion Lee · 80

Construction of Bio-Constrained Code for DNA Data Storage

2019 · Yixin Wang, Md. Noor-A-Rahim, et al. · IEEE Communications Letters · 69

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Novel Method for DNA-Based Elliptic Curve Cryptography for IoT Devices

2018 · Harsh Durga Tiwari, Jae Hyung Kim · ETRI Journal · 54

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DNA Barcode Goes Two-Dimensions: DNA QR Code Web Server

2012 · Chang Liu, Linchun Shi, et al. · PLoS ONE · 52

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An encryption based on DNA cryptography and steganography

2017 · K S Sajisha, Sheena Mathew · 2017 International conference of Electronics, Communication and Aerospace Technology (ICECA) · 48

Algorithm for Coding DNA Sequences into “Spectrum-like” and “Zigzag” Representations

2005 · Jure Zupan, Milan Randić · Journal of Chemical Information and Modeling · 41

i6mA-Caps: a CapsuleNet-based framework for identifying DNA N6-methyladenine sites

2022 · Mobeen Ur Rehman, Hilal Tayara, et al. · Bioinformatics · 38

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DNA-Templated Synthesis of Fluorescent Silver Nanoclusters

2020 · Morgan Chandler, Oleg Shevchenko, et al. · Journal of Chemical Education · 36

DNA sequences useful for computation

1998 · Eric Baum · DIMACS series in discrete mathematics and theoretical computer science · 35

A novel DNA sequence similarity calculation based on simplified pulse-coupled neural network and Huffman coding

2016 · Xin Jin, Rencan Nie, et al. · Physica A Statistical Mechanics and its Applications · 33

A Content-Addressable DNA Database with Learned Sequence Encodings

2018 · Kendall Stewart, Yuan-Jyue Chen, et al. · Lecture notes in computer science · 31

Numerical representation of DNA sequences based on genetic code context and its applications in periodicity analysis of genomes

2008 · Changchuan Yin, Stephen S. -T. Yau · IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) · 29

On Coding for an Abstracted Nanopore Channel for DNA Storage

2021 · Reyna Hulett, Shubham Chandak, et al. · IEEE International Symposium on Information Theory (ISIT) · 28

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Predicting success of oligomerized pool engineering (OPEN) for zinc finger target site sequences

2010 · Jeffry D Sander, Deepak Reyon, et al. · BMC Bioinformatics · 26

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Coding for Optimized Writing Rate in DNA Storage

2020 · Siddharth Jain, Farzad Farnoud, et al. · IEEE International Symposium on Information Theory (ISIT) · 25

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Encoding and Decoding DNA Sequences by Integer Chaos Game Representation

2018 · Changchuan Yin · Journal of Computational Biology · 23

Codon-based encoding for DNA sequence analysis

2014 · Byeong-Soo Jeong, A.T.M. Golam Bari, et al. · Methods · 22

Works count: 243

Citation count: 2,390