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Keyword

gene expression data

Description: Gene expression data are measurements of gene activity, commonly used in molecular biology and computational biology to analyze cellular processes.
OpenAlex ID: keywords/gene-expression-data
WGCNA: an R package for weighted correlation network analysis
2008 · Peter Langfelder, Steve Horvath · BMC Bioinformatics · 27,083
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Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
2002 · R. Edgar · Nucleic Acids Research · 13,243
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Gene Selection for Cancer Classification using Support Vector Machines
2002 · Isabelle Guyon, Jason Weston, et al. · Machine Learning · 9,927
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Missing value estimation methods for DNA microarrays
2001 · Olga Troyanskaya, Michael Cantor, et al. · Bioinformatics · 4,229
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Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
2001 · Alvis Brazma, Pascal Hingamp, et al. · Nature Genetics · 4,099
ONCOMINE: A Cancer Microarray Database and Integrated Data-Mining Platform
2004 · Daniel R. Rhodes, Jianjun Yu, et al. · Neoplasia · 3,612
Using Bayesian Networks to Analyze Expression Data
2000 · Nir Friedman, Michal Linial, et al. · Journal of Computational Biology · 3,268
Sparsity and Smoothness Via the Fused Lasso
2004 · Robert Tibshirani, Michael Saunders, et al. · Journal of the Royal Statistical Society Series B (Statistical Methodology) · 2,734
Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data
2002 · Sandrine Dudoit, Jane Fridlyand, et al. · Journal of the American Statistical Association · 2,672
The Gene Expression Omnibus Database
2016 · Emily Clough, Tanya Barrett · Methods in molecular biology · 2,486
Variance stabilization applied to microarray data calibration and to the quantification of differential expression
2002 · Wolfgang Huber, Anja von Heydebreck, et al. · Bioinformatics · 2,483
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What is principal component analysis?
2008 · Markus Ringnér · Nature Biotechnology · 2,397
Knowledge-based analysis of microarray gene expression data by using support vector machines
2000 · Michael P. S. Brown, William Noble Grundy, et al. · Proceedings of the National Academy of Sciences · 2,311
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Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
2006 · Adrian Alexa, Jörg Rahnenführer, et al. · Bioinformatics · 2,190
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Metagenes and molecular pattern discovery using matrix factorization
2004 · Jean-Philippe Brunet, Pablo Tamayo, et al. · Proceedings of the National Academy of Sciences · 2,174
Biclustering of expression data.
2000 · Y Cheng, G M Church · PubMed · 2,098
Biclustering algorithms for biological data analysis: a survey
2004 · S.C. Madeira, A.L. Oliveira · IEEE Transactions on Computational Biology and Bioinformatics · 2,049
Microarray data normalization and transformation
2002 · John Quackenbush · Nature Genetics · 1,973
Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R
2007 · Peter Langfelder, Bin Zhang, et al. · Bioinformatics · 1,890
Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R
2016 · Davis J McCarthy, Kieran R Campbell, et al. · Bioinformatics · 1,841
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Time-series clustering – A decade review
2015 · Saeed Aghabozorgi, Ali Seyed Shirkhorshidi, et al. · Information Systems · 1,821
Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data
2003 · Eran Segal, Michael Shapira, et al. · Nature Genetics · 1,671
A Shrinkage Approach to Large-Scale Covariance Matrix Estimation and Implications for Functional Genomics
2005 · Juliane Schäfer, Korbinian Strimmer · Statistical Applications in Genetics and Molecular Biology · 1,561
A framework for oligonucleotide microarray preprocessing
2010 · Benilton S. Carvalho, Rafael A. Irizarry · Bioinformatics · 1,551
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A penalized matrix decomposition, with applications to sparse principal components and canonical correlation analysis
2009 · D. M. Witten, R. Tibshirani, et al. · Biostatistics · 1,537
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Works count: 15,330
Citation count: 310,200
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