Keyword

gene function annotation

Description: Assignment of descriptive biological roles to genes, often using sequence, expression, pathway, or literature evidence in genome analysis.

Primary topic: Bioinformatics and Genomic Networks (26%)

OpenAlex ID: keywords/gene-function-annotation

KEGG: Kyoto Encyclopedia of Genes and Genomes

2000 · M. Kanehisa · Nucleic Acids Research · 36,971

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KEGG: new perspectives on genomes, pathways, diseases and drugs

2016 · Minoru Kanehisa, Miho Furumichi, et al. · Nucleic Acids Research · 8,850

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

2009 · Gabriela Bindea, Bernhard Mlecnik, et al. · Bioinformatics · 6,270

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The Gene Ontology Resource: 20 years and still GOing strong

2018 · Consortium, The Gene Ontology · Nucleic Acids Research · 4,738

The Gene Ontology resource: enriching a GOld mine

2020 · Seth Carbon, Eric Douglass, et al. · Nucleic Acids Research · 3,533

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PANTHER: A Library of Protein Families and Subfamilies Indexed by Function

2003 · Paul D. Thomas, Michael J. Campbell, et al. · Genome Research · 2,946

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The Gene Ontology knowledgebase in 2023

2023 · Suzi A Aleksander, James Balhoff, et al. · Genetics · 2,687

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A Gateway Cloning Vector Set for High-Throughput Functional Analysis of Genes in Planta

2003 · Mark D. Curtis, Ueli Grossniklaus · PLANT PHYSIOLOGY · 2,645

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KEGG: biological systems database as a model of the real world

2024 · Minoru Kanehisa, Miho Furumichi, et al. · Nucleic Acids Research · 2,587

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Large-scale gene function analysis with the PANTHER classification system

2013 · Huaiyu Mi, Anushya Muruganujan, et al. · Nature Protocols · 2,468

The Genetic Landscape of a Cell

2010 · Michael Costanzo, Anastasia Baryshnikova, et al. · Science · 2,160

Complete Genome Sequence of the Methanogenic Archaeon, Methanococcus jannaschii

1996 · Carol J. Bult, Owen White, et al. · Science · 2,083

Expansion of the Gene Ontology knowledgebase and resources

2016 · The Gene Ontology Consortium · Nucleic Acids Research · 1,849

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Functional genomic analysis of C. elegans chromosome I by systematic RNA interference

2000 · Andrew G. Fraser, Ravi S. Kamath, et al. · Nature · 1,765

PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees

2012 · Huaiyu Mi, Anushya Muruganujan, et al. · Nucleic Acids Research · 1,734

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The KEGG databases at GenomeNet

2002 · M. Kanehisa · Nucleic Acids Research · 1,505

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Complete genome sequence of Lactobacillus plantarum WCFS1

2003 · Michiel Kleerebezem, Jos Boekhorst, et al. · Proceedings of the National Academy of Sciences · 1,471

Effectiveness of specific RNA-mediated interference through ingested double-stranded RNA in Caenorhabditis elegans

2000 · Ravi S Kamath, Maruxa Martinez-Campos, et al. · Genome biology · 1,314

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Discovery of Gene Function by Expression Profiling of the Malaria Parasite Life Cycle

2003 · Karine G. Le Roch, Yingyao Zhou, et al. · Science · 1,280

GOstat: find statistically overrepresented Gene Ontologies within a group of genes

2004 · Tim Beißbarth, Terence P. Speed · Bioinformatics · 1,257

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Complete Sequence Analysis of the Genome of the Bacterium Mycoplasma Pneumoniae

1996 · R. Himmelreich, H. Hilbert, et al. · Nucleic Acids Research · 1,145

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The Arabidopsis Information Resource (TAIR): gene structure and function annotation

2007 · D. Swarbreck, C. Wilks, et al. · Nucleic Acids Research · 1,076

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ViPTree: the viral proteomic tree server

2017 · Yosuke Nishimura, Takashi Yoshida, et al. · Bioinformatics · 953

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Full-genome RNAi profiling of early embryogenesis in Caenorhabditis elegans

2005 · B. Sönnichsen, L. B. Koski, et al. · Nature · 895

Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III

2000 · Pierre Gönczy, Christophe Echeverri, et al. · Nature · 867

Works count: 3,037

Citation count: 144,700