Keyword

genomic data analysis

Description: Computational and statistical examination of genomic data to identify biological patterns, characterize genetic variation, and support biomedical research.

OpenAlex ID: keywords/genomic-data-analysis

Identification of common molecular subsequences

1981 · T.F. Smith, M.S. Waterman · Journal of Molecular Biology · 9,958

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

2018 · Enis Afgan, Dannon Baker, et al. · Nucleic Acids Research · 3,653

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Orchestrating high-throughput genomic analysis with Bioconductor

2015 · Wolfgang Huber, Vincent J Carey, et al. · Nature Methods · 3,614

GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor

2007 · Sean Davis, Paul S. Meltzer · Bioinformatics · 3,307

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GenePattern 2.0

2006 · Michael Reich, Ted Liefeld, et al. · Nature Genetics · 2,033

Molecular Signatures of Natural Selection

2005 · Rasmus Nielsen · Annual Review of Genetics · 1,647

BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources

2009 · Chunlei Wu, Camilo Orozco, et al. · Genome biology · 1,376

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Deep learning: new computational modelling techniques for genomics

2019 · Gökcen Eraslan, Žiga Avsec, et al. · Nature Reviews Genetics · 1,202

Robust rank aggregation for gene list integration and meta-analysis

2012 · Raivo Kolde, Sven Laur, et al. · Bioinformatics · 1,192

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Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool

2021 · Áine O’Toole, Emily Scher, et al. · Virus Evolution · 1,077

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Random forests for genomic data analysis

2012 · Xi Chen, Hemant Ishwaran · Genomics · 957

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Permutation P-values Should Never Be Zero: Calculating Exact P-values When Permutations Are Randomly Drawn

2010 · Belinda Phipson, Gordon K Smyth · Statistical Applications in Genetics and Molecular Biology · 676

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PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

2009 · Huaiyu Mi, Qing Dong, et al. · Nucleic Acids Research · 609

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ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

2009 · Martin Morgan, Simon Anders, et al. · Bioinformatics · 559

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Deploying whole genome sequencing in clinical practice and public health: Meeting the challenge one bin at a time

2011 · Jonathan S. Berg, Muin J. Khoury, et al. · Genetics in Medicine · 490

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The ecologist's field guide to sequence‐based identification of biodiversity

2016 · Simon Creer, Kristy Deiner, et al. · Methods in Ecology and Evolution · 460

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Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions

2018 · Sarah M. Urbut, Gao Wang, et al. · Nature Genetics · 419

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Alignment Uncertainty and Genomic Analysis

2008 · Karen M. Wong, Marc A. Suchard, et al. · Science · 411

Precision Oncology: An Overview

2013 · Levi A. Garraway, Jaap Verweij, et al. · Journal of Clinical Oncology · 403

Qualitative simulation of genetic regulatory networks using piecewise-linear models

2003 · H DEJONG, J GOUZE, et al. · Bulletin of Mathematical Biology · 386

The real cost of sequencing: scaling computation to keep pace with data generation

2016 · Paul Muir, Shantao Li, et al. · Genome biology · 368

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A selective review of group selection in high-dimensional models

2012 · Jian Huang, Patrick Breheny, et al. · 340

Cloud computing for genomic data analysis and collaboration

2018 · Ben Langmead, Abhinav Nellore · Nature Reviews Genetics · 310

ObliVM: A Programming Framework for Secure Computation

2015 · Chang Liu, Xiao Shaun Wang, et al. · Proceedings - IEEE Symposium on Security and Privacy/Proceedings of the ... IEEE Symposium on Security and Privacy · 309

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A Selective Review of Group Selection in High-Dimensional Models

2012 · Jian Huang, Patrick Breheny, et al. · Statistical Science · 300

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Works count: 2,456

Citation count: 48,670