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Keyword

microarray data

Description: Biological measurements generated by microarray experiments, commonly used to study gene expression and other molecular features across many probes.
OpenAlex ID: keywords/microarray-data
limma powers differential expression analyses for RNA-sequencing and microarray studies
2015 · Matthew E. Ritchie, Belinda Phipson, et al. · Nucleic Acids Research · 40,200
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GSVA: gene set variation analysis for microarray and RNA-Seq data
2013 · Sonja Hänzelmann, Robert Castelo, et al. · BMC Bioinformatics · 15,358
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Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
2002 · R. Edgar · Nucleic Acids Research · 13,243
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NCBI GEO: archive for functional genomics data sets—update
2012 · Tanya Barrett, Stephen E. Wilhite, et al. · Nucleic Acids Research · 10,374
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limma: Linear Models for Microarray Data
2005 · G. K. Smyth · Springer eBooks · 5,842
Missing value estimation methods for DNA microarrays
2001 · Olga Troyanskaya, Michael Cantor, et al. · Bioinformatics · 4,229
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Minimum information about a microarray experiment (MIAME)—toward standards for microarray data
2001 · Alvis Brazma, Pascal Hingamp, et al. · Nature Genetics · 4,099
GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor
2007 · Sean Davis, Paul S. Meltzer · Bioinformatics · 3,307
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Using Bayesian Networks to Analyze Expression Data
2000 · Nir Friedman, Michal Linial, et al. · Journal of Computational Biology · 3,268
Gene selection and classification of microarray data using random forest
2006 · Ramón Díaz-Uriarte, Sara Alvarez de Andrés · BMC Bioinformatics · 2,930
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Support vector machine classification and validation of cancer tissue samples using microarray expression data
2000 · Terrence S. Furey, Nello Cristianini, et al. · Bioinformatics · 2,443
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DAVID: Database for Annotation, Visualization, and Integrated Discovery
2003 · Glynn Dennis, Brad T Sherman, et al. · Genome biology · 2,379
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Topology and data
2009 · Gunnar Carlsson · Bulletin of the American Mathematical Society · 2,297
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A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules
2003 · Joshua M. Stuart, Eran Segal, et al. · Science · 2,257
Improved scoring of functional groups from gene expression data by decorrelating GO graph structure
2006 · Adrian Alexa, Jörg Rahnenführer, et al. · Bioinformatics · 2,190
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Biclustering algorithms for biological data analysis: a survey
2004 · S.C. Madeira, A.L. Oliveira · IEEE Transactions on Computational Biology and Bioinformatics · 2,049
Identifying biological themes within lists of genes with EASE
2003 · Douglas A Hosack, Glynn Dennis, et al. · Genome biology · 1,950
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Empirical Bayes Analysis of a Microarray Experiment
2001 · Bradley Efron, Robert Tibshirani, et al. · Journal of the American Statistical Association · 1,734
NCBI GEO: mining tens of millions of expression profiles--database and tools update
2006 · T. Barrett, D. B. Troup, et al. · Nucleic Acids Research · 1,523
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GAGE: generally applicable gene set enrichment for pathway analysis
2009 · Weijun Luo, Michael S Friedman, et al. · BMC Bioinformatics · 1,332
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GOstat: find statistically overrepresented Gene Ontologies within a group of genes
2004 · Tim Beißbarth, Terence P. Speed · Bioinformatics · 1,257
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NCBI GEO: mining millions of expression profiles--database and tools
2004 · T. Barrett · Nucleic Acids Research · 1,207
Gene expression–based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study
2008 · Kerby Shedden, Jeremy M G Taylor, et al. · Nature Medicine · 1,190
pcaMethods—a bioconductor package providing PCA methods for incomplete data
2007 · Wolfram Stacklies, Henning Redestig, et al. · Bioinformatics · 1,155
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NCBI GEO: archive for functional genomics data sets--10 years on
2010 · T. Barrett, D. B. Troup, et al. · Nucleic Acids Research · 1,126
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Works count: 10,670
Citation count: 330,400
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