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Keyword

protein function prediction

Description: The computational inference of biological roles or activities of proteins from sequence, structure, interaction, or other molecular data.
Wikidata ID: wiki/Q7251473
OpenAlex ID: keywords/protein-function-prediction
The Phyre2 web portal for protein modeling, prediction and analysis
2015 · Lawrence A Kelley, Stefans Mezulis, et al. · Nature Protocols · 9,646
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InterProScan 5: genome-scale protein function classification
2014 · Philip Jones, David Binns, et al. · Bioinformatics · 9,336
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SIFT: predicting amino acid changes that affect protein function
2003 · P. C. Ng · Nucleic Acids Research · 6,588
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Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
2009 · Prateek Kumar, Steven Henikoff, et al. · Nature Protocols · 6,520
I-TASSER: a unified platform for automated protein structure and function prediction
2010 · Ambrish Roy, Alper Kucukural, et al. · Nature Protocols · 6,175
The I-TASSER Suite: protein structure and function prediction
2014 · Jianyi Yang, Renxiang Yan, et al. · Nature Methods · 5,593
Accurate prediction of protein structures and interactions using a three-track neural network
2021 · Minkyung Baek, Frank DiMaio, et al. · Science · 5,472
Predicting Functional Effect of Human Missense Mutations Using PolyPhen‐2
2013 · Ivan Adzhubei, Daniel M. Jordan, et al. · Current Protocols in Human Genetics · 3,700
An efficient algorithm for large-scale detection of protein families
2002 · A. J. Enright · Nucleic Acids Research · 3,590
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PANTHER: A Library of Protein Families and Subfamilies Indexed by Function
2003 · Paul D. Thomas, Michael J. Campbell, et al. · Genome Research · 2,946
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Predicting the Functional Effect of Amino Acid Substitutions and Indels
2012 · Yongwook Choi, Gregory E. Sims, et al. · PLoS ONE · 2,888
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Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
2017 · Jaime Huerta-Cepas, Kristoffer Forslund, et al. · Molecular Biology and Evolution · 2,703
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Predicting Deleterious Amino Acid Substitutions
2001 · Pauline C. Ng, Steven Henikoff · Genome Research · 2,693
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SIFT web server: predicting effects of amino acid substitutions on proteins
2012 · Ngak-Leng Sim, Prateek Kumar, et al. · Nucleic Acids Research · 2,415
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HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment
2011 · Michael Remmert, Andreas Biegert, et al. · Nature Methods · 2,287
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Human non-synonymous SNPs: server and survey
2002 · V. Ramensky · Nucleic Acids Research · 2,280
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PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization
1999 · Kenta Nakai, Kenta Nakai, et al. · Trends in Biochemical Sciences · 2,181
Prediction of protein cellular attributes using pseudo‐amino acid composition
2001 · Kuo‐Chen Chou · Proteins Structure Function and Bioinformatics · 1,946
Prediction of protein subcellular localization
2006 · Chin‐Sheng Yu, Yu‐Ching Chen, et al. · Proteins Structure Function and Bioinformatics · 1,796
ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins
2006 · E. de Castro, C. J. A. Sigrist, et al. · Nucleic Acids Research · 1,685
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Detecting Protein Function and Protein-Protein Interactions from Genome Sequences
1999 · Edward M. Marcotte, Matteo Pellegrini, et al. · Science · 1,670
Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
1999 · Matteo Pellegrini, Edward M. Marcotte, et al. · Proceedings of the National Academy of Sciences · 1,586
InterPro in 2017—beyond protein family and domain annotations
2016 · Robert D. Finn, Teresa K. Attwood, et al. · Nucleic Acids Research · 1,483
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The PredictProtein server
2004 · B. Rost, G. Yachdav, et al. · Nucleic Acids Research · 1,463
The Complete DNA Sequence of Varicella-Zoster Virus
1986 · Andrew J. Davison, James E. Scott · Journal of General Virology · 1,420
Works count: 9,537
Citation count: 277,900
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