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Keyword

proteogenomics

Description: An interdisciplinary approach combining genomics, transcriptomics, and proteomics to identify and characterize proteins encoded by genomic sequences.
Wikidata ID: wiki/Q7251534
OpenAlex ID: keywords/proteogenomics
A draft map of the human proteome
2014 · Min-Sik Kim, Sneha M. Pinto, et al. · Nature · 2,197
Mass-spectrometry-based draft of the human proteome
2014 · Mathias Wilhelm, Judith Schlegl, et al. · Nature · 1,821
Proteogenomics connects somatic mutations to signalling in breast cancer
2016 · NCI CPTAC, Philipp Mertins, et al. · Nature · 1,668
Proteogenomic characterization of human colon and rectal cancer
2014 · the NCI CPTAC, Bing Zhang, et al. · Nature · 1,459
Integrated Proteogenomic Characterization of HBV-Related Hepatocellular Carcinoma
2019 · Qiang Gao, Hongwen Zhu, et al. · Cell · 1,089
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Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer
2016 · Hui Zhang, Tao Liu, et al. · Cell · 1,027
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Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma
2020 · Michael A. Gillette, Shankha Satpathy, et al. · Cell · 813
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Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities
2019 · Suhas Vasaikar, Chen Huang, et al. · Cell · 797
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Proteogenomics: concepts, applications and computational strategies
2014 · Alexey I Nesvizhskii · Nature Methods · 774
A deep proteome and transcriptome abundance atlas of 29 healthy human tissues
2019 · Dongxue Wang, Basak Eraslan, et al. · Molecular Systems Biology · 749
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Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma
2019 · David J. Clark, Saravana M. Dhanasekaran, et al. · Cell · 726
Proteogenomic and metabolomic characterization of human glioblastoma
2021 · Liang-Bo Wang, Alla Karpova, et al. · Cancer Cell · 658
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Proteogenomic characterization of pancreatic ductal adenocarcinoma
2021 · Liwei Cao, Chen Huang, et al. · Cell · 577
Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy
2020 · Karsten Krug, Eric J. Jaehnig, et al. · Cell · 544
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Noncoding regions are the main source of targetable tumor-specific antigens
2018 · Céline M. Laumont, Krystel Vincent, et al. · Science Translational Medicine · 535
Proteogenomic Characterization of Endometrial Carcinoma
2020 · Yongchao Dou, Emily A. Kawaler, et al. · Cell · 484
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry
2018 · Philipp Mertins, Lauren C. Tang, et al. · Nature Protocols · 482
Genetics meets proteomics: perspectives for large population-based studies
2020 · Karsten Suhre, Mark I. McCarthy, et al. · Nature Reviews Genetics · 475
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
2018 · Manuel Tardaguila, Lorena de la Fuente, et al. · Genome Research · 457
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A clinically applicable integrative molecular classification of meningiomas
2021 · Farshad Nassiri, Jeff Liu, et al. · Nature · 451
Proteogenomic characterization identifies clinically relevant subgroups of intrahepatic cholangiocarcinoma
2021 · Liangqing Dong, Dayun Lu, et al. · Cancer Cell · 394
A proteogenomic portrait of lung squamous cell carcinoma
2021 · Shankha Satpathy, Karsten Krug, et al. · Cell · 380
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Proteogenomics of Non-smoking Lung Cancer in East Asia Delineates Molecular Signatures of Pathogenesis and Progression
2020 · Yi-Ju Chen, Theodoros I. Roumeliotis, et al. · Cell · 380
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Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma
2021 · Chen Huang, Lijun Chen, et al. · Cancer Cell · 364
Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes
2020 · Chloe Chong, Markus Müller, et al. · Nature Communications · 348
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Works count: 3,563
Citation count: 60,530
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