Keyword

proteomics

Description: Proteomics is the large-scale study of proteins, including their abundance, structure, functions, and interactions in biological systems.

Primary topic: Advanced Proteomics Techniques and Applications (31%)

Wikidata ID: wiki/Q471857

OpenAlex ID: keywords/proteomics

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

2012 · Guangchuang Yu, Li-Gen Wang, et al. · OMICS A Journal of Integrative Biology · 36,109

Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal

2013 · Jianjiong Gao, Bülent Arman Aksoy, et al. · Science Signaling · 15,124

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Manual of Clinical Microbiology.

1980 · Annals of Internal Medicine · 14,411

The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest

2022 · Damian Szklarczyk, Rebecca Kirsch, et al. · Nucleic Acids Research · 9,479

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Sparse inverse covariance estimation with the graphical lasso

2007 · Jerome Friedman, Trevor Hastie, et al. · Biostatistics · 6,344

ExPASy: the proteomics server for in-depth protein knowledge and analysis

2003 · E. Gasteiger · Nucleic Acids Research · 5,605

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In-gel digestion for mass spectrometric characterization of proteins and proteomes

2006 · Andrej Shevchenko, Henrik Tomas, et al. · Nature Protocols · 4,948

Multiplexed Protein Quantitation in Saccharomyces cerevisiae Using Amine-reactive Isobaric Tagging Reagents

2004 · Philip L. Ross, Yulin N. Huang, et al. · Molecular & Cellular Proteomics · 4,399

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A cross-platform toolkit for mass spectrometry and proteomics

2012 · Matthew C Chambers, Brendan Maclean, et al. · Nature Biotechnology · 4,111

mixOmics: An R package for ‘omics feature selection and multiple data integration

2017 · Florian Rohart, Benoît Gautier, et al. · PLoS Computational Biology · 4,016

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MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

2010 · Tomáš Pluskal, Sandra Castillo, et al. · BMC Bioinformatics · 3,844

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The Proteomics Protocols Handbook

2005 · Walker, John M · Humana Press eBooks · 3,547

Gene Set Knowledge Discovery with Enrichr

2021 · Zhuorui Xie, Allison Bailey, et al. · Current Protocols · 3,533

The growing impact of click chemistry on drug discovery

2003 · Hartmuth C Kolb, K.Barry Sharpless · Drug Discovery Today · 3,149

ATM and ATR Substrate Analysis Reveals Extensive Protein Networks Responsive to DNA Damage

2007 · Shuhei Matsuoka, Bryan A. Ballif, et al. · Science · 3,071

Multi-omics approaches to disease

2017 · Yehudit Hasin, Marcus Seldin, et al. · Genome biology · 2,922

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Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis

2012 · Ludovic C. Gillet, Pedro Navarro, et al. · Molecular & Cellular Proteomics · 2,872

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Integration of biological networks and gene expression data using Cytoscape

2007 · Melissa S Cline, Michael Smoot, et al. · Nature Protocols · 2,504

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The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

2011 · Philippe Lamesch, Tanya Z. Berardini, et al. · Nucleic Acids Research · 2,404

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Two‐dimensional electrophoresis. The current state of two‐dimensional electrophoresis with immobilized pH gradients

1988 · Angelika Görg, Wilhelm Postel, et al. · Electrophoresis · 2,401

DAVID: Database for Annotation, Visualization, and Integrated Discovery

2003 · Glynn Dennis, Brad T Sherman, et al. · Genome biology · 2,381

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Proteomics to study genes and genomes

2000 · Akhilesh Pandey, Matthias Mann · Nature · 2,373

LinkedOmics: analyzing multi-omics data within and across 32 cancer types

2017 · Suhas V Vasaikar, Peter Straub, et al. · Nucleic Acids Research · 2,318

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Heatmapper: web-enabled heat mapping for all

2016 · Sasha Babicki, David Arndt, et al. · Nucleic Acids Research · 2,288

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American Society of Clinical Oncology 2007 Update of Recommendations for the Use of Tumor Markers in Breast Cancer

2007 · Lyndsay Harris, Herbert Fritsche, et al. · Journal of Clinical Oncology · 2,217

Works count: 94,850

Citation count: 1,124,000