Keyword

quantitative proteomics

Description: Quantitative proteomics is an analytical approach that measures and compares the abundance of proteins in biological samples.

Primary topic: Advanced Proteomics Techniques and Applications (60%)

Wikidata ID: wiki/Q7268939

OpenAlex ID: keywords/quantitative-proteomics

The Perseus computational platform for comprehensive analysis of (prote)omics data

2016 · Stefka Tyanova, Tikira Temu, et al. · Nature Methods · 8,254

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The PRIDE database and related tools and resources in 2019: improving support for quantification data

2018 · Yasset Perez-Riverol, Attila Csordas, et al. · Nucleic Acids Research · 6,698

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Stable Isotope Labeling by Amino Acids in Cell Culture, SILAC, as a Simple and Accurate Approach to Expression Proteomics

2002 · Shao-En Ong, Blagoy Blagoev, et al. · Molecular & Cellular Proteomics · 5,570

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The MaxQuant computational platform for mass spectrometry-based shotgun proteomics

2016 · Stefka Tyanova, Tikira Temu, et al. · Nature Protocols · 4,817

Quantitative proteomics identifies NCOA4 as the cargo receptor mediating ferritinophagy

2014 · Joseph D. Mancias, Xiaoxu Wang, et al. · Nature · 2,065

Correlation of mRNA and protein in complex biological samples

2009 · Tobias Maier, Marc Güell, et al. · FEBS Letters · 1,802

Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells

2014 · Nils A Kulak, Garwin Pichler, et al. · Nature Methods · 1,714

Quantitative mass spectrometry in proteomics: a critical review

2007 · Marcus Bantscheff, Markus Schirle, et al. · Analytical and Bioanalytical Chemistry · 1,671

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Systematic and Quantitative Assessment of the Ubiquitin-Modified Proteome

2011 · Woong Kim, Eric J. Bennett, et al. · Molecular Cell · 1,614

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Mass spectrometry–based proteomics turns quantitative

2005 · Shao-En Ong, Matthias Mann · Nature Chemical Biology · 1,573

Selected reaction monitoring for quantitative proteomics: a tutorial

2008 · Vinzenz Lange, Paola Picotti, et al. · Molecular Systems Biology · 1,408

Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics

2009 · Paul J Boersema, Reinout Raijmakers, et al. · Nature Protocols · 1,357

Selected reaction monitoring–based proteomics: workflows, potential, pitfalls and future directions

2012 · Paola Picotti, Ruedi Aebersold · Nature Methods · 1,301

Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics

2012 · Amelia C. Peterson, Jason D. Russell, et al. · Molecular & Cellular Proteomics · 1,286

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A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances

2015 · Marco Y. Hein, Nina C. Hubner, et al. · Cell · 1,268

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Quantitative Mass Spectrometric Multiple Reaction Monitoring Assays for Major Plasma Proteins

2005 · Leigh Anderson, Christie L. Hunter · Molecular & Cellular Proteomics · 1,239

Extending the Limits of Quantitative Proteome Profiling with Data-Independent Acquisition and Application to Acetaminophen-Treated Three-Dimensional Liver Microtissues

2015 · Roland Bruderer, Oliver M. Bernhardt, et al. · Molecular & Cellular Proteomics · 1,233

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MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experiments

2014 · Meena Choi, Ching-Yun Chang, et al. · Bioinformatics · 1,040

Statistical Analysis of Membrane Proteome Expression Changes in Saccharomyces cerevisiae

2006 · Boris Zybailov, Amber L. Mosley, et al. · Journal of Proteome Research · 1,029

Data‐independent acquisition‐based SWATH‐MS for quantitative proteomics: a tutorial

2018 · Christina Ludwig, Ludovic Gillet, et al. · Molecular Systems Biology · 1,010

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MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics

2011 · Lily Ting, Ramin Rad, et al. · Nature Methods · 1,007

Quantitative Proteomics of the Cancer Cell Line Encyclopedia

2020 · David P. Nusinow, John Szpyt, et al. · Cell · 954

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Functional and quantitative proteomics using SILAC

2006 · Matthias Mann · Nature Reviews Molecular Cell Biology · 931

diaPASEF: parallel accumulation–serial fragmentation combined with data-independent acquisition

2020 · Florian Meier, Andreas-David Brunner, et al. · Nature Methods · 906

A practical recipe for stable isotope labeling by amino acids in cell culture (SILAC)

2006 · Shao-En Ong, Matthias Mann · Nature Protocols · 897

Works count: 6,446

Citation count: 197,600