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Microbiome Analysis with Oxford Nanopore 16S amplicon sequencing data

Year: 2021

Type: article

Abstract: The resource is a brief description of an analysis pipeline for microbiome analysis of Oxford Nanopore 16S amplicon sequence data. We tested the Kraken 2 and Krona pipeline from nanogalaxy with data obtained from nanopore sequencing of 16S DNA extracted from dog feces, conducted by an undergraduate student.

Source: QUBES

DOI: 10.25334/tm6s-je24

Authors: Tarun, Alice, Weng, Mao-Lun

Institutions: St. Lawrence University, St. Lawrence University, Westfield State University

Language: English

Topic: Genomics and Phylogenetic Studies

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W3214967769

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