Whole-Genome Sequencing-Based Re-Identification of Pseudomonas putida / fluorescens Clinical Isolates Identified by Biochemical Bacterial Identification Systems
Year: 2022
Type: article
Abstract: Most of the clinical isolates, identified as P. putida or P. fluorescens, were misidentified in clinical laboratories. Whole-genome sequencing (WGS) revealed that these isolates belonged to different Pseudomonas species, including novel species. WGS is a gold-standard method to identify Pseudomonas species, and MALDI-TOF MS analysis has the potential to complement WGS to reliably identify them.
Source: Microbiology Spectrum
Authors: Mari Tohya, Kanae Teramoto, Shin Watanabe, Tomomi Hishinuma, Masahito Shimojima, Miho Ogawa, Tatsuya Tada, Yoko Tabe, Teruo Kirikae
Institutions: Juntendo University, BML (Japan)
Language: English
Subfield: Microbiology (medical)
Field: Medicine
Domain: Health Sciences
Open Access status: gold
Estimated APC paid: $2,500
Awards: G1698349233, Development of a new diagnostic and therapeutic platform for swine Streptococcus infections to prevent the emergence of drug-resistant strains., ヒト由来Pseudomonas属菌株の菌種再分類及び臨床細菌学的特性, Conprehensive functional analyses of cell-wall proteins of Streptococcus suis, G3039138544, Elucidating the evolution of carbapenemases produced by multidrug-resistant pseudomonas aeruginosa in Japan, International collaboration study on diversity and evolution of carbapenem-resistant Pseudomonas aeruginosa clinical isolates in Myanmar, G725826137, G7279374841, G75772401, G8322132688, G8580705676, Classification and molecular epidemiological analysis of carbapenem resistant strains including P. asiensis and its related species.
OpenAlex ID: W4225097397