Year: 2026
Type: article
Abstract: Whole-brain models are valuable tools for understanding brain dynamics in health and disease by enabling the testing of causal mechanisms and identification of therapeutic targets through dynamic simulations. Among these models, biophysically inspired neural mass models have been widely used to simulate electrophysiological recordings, such as MEG and EEG. However, traditional models face limitations, including susceptibility to hyperexcitation, which constrains their ability to capture the full richness of neural dynamics. Here, we developed and characterized a new version of the Jansen-Rit neural mass model aimed at overcoming these limitations. Our model incorporates inhibitory synaptic plasticity (ISP), which adjusts inhibitory feedback onto pyramidal neurons to clamp their firing rates around a target value. Further, the model combined two subpopulations of neural cortical columns oscillating in α and γ, respectively, to generate a richer EEG power spectrum. We analyzed how different model parameters modulate oscillatory frequency and connectivity. We considered a model’s showcase, simultaneously fitting EEG and fMRI recordings during NREM sleep. Bifurcation analysis showed that ISP increases the parameters’ range in which the model exhibited sustained oscillations; the target firing rate acts as a bifurcation parameter, moving the system across the bifurcation point, producing different oscillatory regimes, from slower to faster. High frequency activity emerged from low global coupling, high firing rates, and a high proportion of γ versus α subpopulations. Importantly, ISP was necessary in the multi-frequency model to successfully fit EEG functional connectivity across frequency bands. Finally, ISP-controlled reductions in excitability reproduced both the slow-wave activity and the reduced connectivity in NREM sleep. Altogether, our model is compatible with biological evidence of the effects of E/I balance on modulating brain rhythms and connectivity, as observed in sleep, neurodegeneration, and chemical neuromodulation. This biophysical model with ISP provides a springboard for realistic brain simulations in health and disease. Author Summary Macroscale brain activity can be captured using techniques like EEG and fMRI. However, the granular or more detailed activity of neurons and neural masses is inaccessible. A solution is the use of whole-brain models, although they are not free from limitations, they can simulate EEG and fMRI recordings from mathematical equations and empirical data. One first limitation in these models is hyperexcitation. When the coupling between brain areas increases, brain areas might become aberrantly hyperexcitable if no compensatory mechanisms are considered. To address this, we introduce a mechanism in the model that dynamically modifies feedback inhibition to compensate for this excitability increase when running simulations. A second limitation is that many models fail to reproduce the spectral richness of EEG signals. EEG recordings reflect interweaving slower and faster rhythms, and some traditional models of EEG fail in capturing the spectral range of electrophysiological recordings. Here, we addressed this by combining two subpopulations of cortical columns within single brain areas, each one oscillating within the α and γ bands of EEG. Their combined activity generates EEG oscillations resembling the slower rhythms observed during sleep, and the faster ones triggered by increased attentional load. We ran different types of simulations and analyses to fully characterize our model. We observed that controlling system excitability is necessary to fully capture EEG connectivity and to simultaneously reproduce the EEG power spectrum and fMRI dynamics. Moreover, we showed that reduced/increased brain excitability is the cause of the emergence of the slowest/fastest EEG rhythms. The model can be used to characterize how connectivity and brain dynamics are altered in different types of conditions, such as chemical neuromodulation, drug delivery, altered states of consciousness, and neurodegenerative disorders. Our model is open access, well-documented, and introduced with tutorials, in the way to make it accessible to the whole neuroscience community.
Source: PLoS Computational Biology
Institutions: University of California, San Francisco, Trinity College Dublin, Adolfo Ibáñez University, Global Brain Health Institute, Consejo Superior de Investigaciones Científicas, Institute for Cross-Disciplinary Physics and Complex Systems, Universitat de les Illes Balears, Centre National de la Recherche Scientifique, Inserm, Sorbonne Université, Institut du Cerveau, University of Nottingham, Northeastern University London, Uniwersytet SWPS, Universidad San Sebastián, Valparaiso University, University of Valparaíso
Language: English
Subfield: Cognitive Neuroscience
Field: Neuroscience
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $3,043
Funders: Foundation for the National Institutes of Health, Alzheimer's Association, Wellcome Trust, Ministerio de Ciencia, Innovación y Universidades, Rainwater Charitable Foundation, Narodowym Centrum Nauki, Agencia Nacional de Investigación y Desarrollo, National Institutes of Health, HORIZON EUROPE Framework Programme, National Institute on Aging, Fogarty International Center, Fondo de Fomento al Desarrollo Científico y Tecnológico, Fondo de Financiamiento de Centros de Investigación en Áreas Prioritarias
Awards: G103627852, G1581799926, NEUROVASCULAR PATHWAYS IN AGING AND NEURODEGENERATIVE DISEASES (ND): INTEGRATING CARDIOVASCULAR HEALTH AND BRAIN FUNCTION, G1919018801, G2113303780, G2118524674, MACHINE LEARNING FOR MENTAL HEALTH NEW DEVELOPMENTS AND APPLICATIONS USING MULTIMODAL DATA, BIOLOGIC EMBEDDING OF SOCIAL INEQUALITY AND LIFESTYLE IN AGING AND DEMENTIA, G3481889345, G3628792472, CENTRO DE GEROCIENCIA SALUD MENTAL Y METABOLISMO (GERO), G3949186969, G4319372948, NEXT GENERATION OF WHOLE-BRAIN COMPUTATIONAL MODELS FOR UNDERSTANDING AND MODULATING NEURODEGENERATIVE DISEASES., MACHINE LEARNING PARA EL DIAGNOSTICO PRECOZ Y PERFIL MULTIMODAL DE LA ENFERMEDAD DE ALZHEIMER BASADO EN MIRNA DE EXOSOMAS CIRCULANTES., SENSITIVE NEUROCOGNITIVE MARKERS OF NEURODEGENERATION A MULTI-FEATURE FRAMEWORK, G7616641907, NATURAL SPEECH MARKERS OF NEURODEGENERATION AN INTERDISCIPLINARY APPROACH FOR DISEASE DISCRIMINATION AND SYMPTOM TRACKING, G7924038339, MAPPING AND MODELING THE HEALTHY AND PATHOLOGICAL AGING TRAJECTORIES OF THE HUMAN BRAIN, G883642430, US-South American Initiative for Genetic-Neural-Behavioral Interactions in Human Neurodegenerative Research, Social epigenetics of Alzheimer's disease and related dementias in Latin American countries, An automated machine learning approach to language changes in Alzheimer’s disease and frontotemporal dementia across Latino and English-speaking populations, Circadian Disturbance and Dementia in Latin America, BRAIN-CLIMA: Investigating the Combined Impact of Heat and Air Pollution on Blood-Brain Barrier Integrity and Brain Aging in Latin America, G906244395
OpenAlex ID: W4413856431
