Scalable purification enables high-quality virus-like particles for therapeutic translation
Year: 2025
Type: article
Abstract: Emerging molecular therapies introduce enzymatic activity into cells by delivering genes, transcripts, or proteins. Owing to their robust cell-entry capacity, virus-like particles (VLPs) represent a technology of choice in genome editing, where low doses of heterologous proteins and nucleic acids are essential. However, clinical translation of VLP vectors is hindered by inadequate purification methods. Current approaches, relying primarily on ultracentrifugation, suffer from inconsistent product quality and poor scalability. Here, we report the development of a broadly applicable purification strategy that improves the purity and therapeutic efficacy of genome-editing VLPs. Considering the characteristic properties of murine leukemia virus-derived engineered VLPs and HIV-derived engineered nucleocytosolic vehicles for loading of programmable editors, we developed a workflow that involves single-modal and multimodal chromatographic steps, effectively removing host cell proteins and cell-culture contaminants while improving VLP integrity and biological activity. Our purified VLPs displayed superior protein composition, consistency, and enhanced functional delivery compared to VLPs partially purified by conventional ultracentrifugation methods. Mass spectrometric analysis revealed a substantial decrease in contaminants, with VLP-specific proteins comprising >90% of the final product. In vivo studies confirmed improved therapeutic outcomes when chromatographically purified VLPs were used. Our scalable purification platform addresses critical manufacturing bottlenecks and constitutes a starting point for further development of VLP therapeutics, enabling robust production of pure VLPs for diverse applications such as genome editing, vaccine development, and other uses that require intracellular protein delivery.
Source: Journal of Biological Chemistry
Language: English
Subfield: Genetics
Domain: Life Sciences
Open Access status: gold
Estimated APC paid: $3,430
Funders: Howard Hughes Medical Institute, Arnold and Mabel Beckman Foundation, Foundation Fighting Blindness, Knights Templar Eye Foundation, Research to Prevent Blindness, Schmidt Family Foundation, UC Irvine Materials Research Institute, National Institutes of Health, University of California, Irvine, Natural Sciences and Engineering Research Council of Canada, National Human Genome Research Institute, National Eye Institute, National Institute of General Medical Sciences, National Institute of Allergy and Infectious Diseases, School of Medicine, University of California, Irvine
Awards: Delivery Technologies for In Vivo Genome Editing, G269652695, G3570214930, Expanding the Scope of Base Editing, Medical Scientist Training Program, G7032010522, G853170728, Editing AMD Risk Alleles in Human Cells, Retinoids in Vision, microRNA-204 and microRNA-211 regulation of RPE phagocytosis, Integrating Chemistry and Evolution to Illuminate Biology and Enable Novel Therapeutics, Center for Genomic Editing and Recording: Development and Application of Next-Generation Genome and Epigenome Editing Methods to Advance the Study and Treatment of Human Disease, Precision genome editing in vivo to treat retinal diseases, NEI UCI Center Core Grant for Vision Research
OpenAlex ID: W4416265373
