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System of Pathology Agents for Research and Knowledge (SPARK): code, parameters and reference books for parameters

Year: 2025
Type: other
Abstract: This repositorium contains accompanying information to SPARK pipeline: "System of Pathology Agents for Research and Knowledge (SPARK): Autonomous Scientific Discovery in Pathology" 1. SPARK-main.zip Full code of SPARK pipeline and accompanying WSI processing pipelines. 2. SPARK_parameter_html_books.zip Detailed reference books to all SPARK parameters with easy navigation and search function. 3. SPARK_database_refined_ideas_all_use_cases.zip Database of refined SPARK ideas (input for coding pipeline), 4. SPARK_parameter_python_functions.zip Separate archive of coded SPARK parameters as Python functions (also part of SPARK-main.zip) 5. SPARK_human_pathologists_idea_database.zip Database of refined human pathologists' ideas (input for coding pipeline), 6. SPARK_human_pathologists_python_functions.zip Separate archive of coded parameters (human pathologists' ideas) as Python functions. For more details, please refer to original publication and the GitHub repository: https://github.com/cpath-ukk/SPARK For using SPARK pipeline and any of its components and coded parameters, the original publication must be cited: "System of Pathology Agents for Research and Knowledge (SPARK): Autonomous Scientific Discovery in Pathology" [Journal, Year] [Paper DOI]
Language: English
Open Access status: green
OpenAlex ID: W7117246382
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