Work

MOESM1 of The cnidarian Hydractinia echinata employs canonical and highly adapted histones to pack its DNA

Year: 2016

Type: article

Abstract: Additional file 1. S1. Histone cluster copy number estimation. (A) 17-mer k-mer counts showing an approx. 20X coverage peak for genomic Illumina paired end read from Hydractinia echinata genomic DNA libraries. (B) A second peak and third peak are found at approx. 28,000X and 46,000X coverage. The k-mers from these peaks encode either histone genes or 28S rRNA genes. Based on the 20X coverage of all k-mers this suggests that 1400 copies of the histone cluster and 2300 copies of the 28S rRNA cluster are present in the Hydractinia echinata diploid genome (700 histone cluster and 1150 28S rRNA cluster copies per halpoid genome).

Source: Figshare

DOI: 10.6084/m9.figshare.4372712

Authors: Tรถrรถk, Anna, Schiffer, Philipp, Schnitzler, Christine, Ford, Kris, Mullikin, James, Baxevanis, Andreas, Bacic, Antony, Frank, Uri, Gornik, Sebastian

Language: English

Topic: Genomics and Chromatin Dynamics

Subfield: Molecular Biology

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W7136170076

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