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Additional file 10 of Imputed whole genome sequence based association pinpoints genetic architecture of labour dystocia of pigs using multi-breed populations

Year: 2026

Type: other

Abstract: Supplementary Material 10: Regional Manhattan plots of GWAS results before and after conditional analysis for primiparous Yorkshire pigs. (a) Results for the SSC2 region (22.6–23.8 Mb). The top panel shows the original GWAS associations, with the top SNP at 2:23327820 (P = 3.21E-09) marked. The bottom panel shows associations after conditional analysis on the top SNP; (b) Results for the SSC9 region (43.3–44.2 Mb). The top panel shows the original associations, with the top SNP at 9:43672208 (P = 3.78E-07) marked. The bottom panel shows associations after conditional analysis on the top SNP. Points are coloured according to their linkage disequilibrium (R²) with the top SNP, ranging from blue (R² = 0) to red (R² = 1.00). The red and blue dashed lines indicate the genome-wide significance (P = 5.00E-08) and suggestive significance (P = 1.00E-06) thresholds, respectively.

Source: Figshare

DOI: 10.6084/m9.figshare.33325975

Authors: Shenping Zhou, Jinyi Han, Jingli Yuan, Chuanmin Qiao, Zhe Chao, Dongdong Duan, Mengyu Li, Zhenyu Wang, Shuyi Tan, Xinjian Li, Wenshui Xin

Institutions: Hainan Provincial Academy of Agricultural Sciences, Jiangxi Agricultural University

Language: English

Topic: Genetic and phenotypic traits in livestock

Subfield: Genetics

Field: Biochemistry, Genetics and Molecular Biology

Domain: Life Sciences

SDGs: Zero hunger, Good health and well-being

Open Access status: green

OpenAlex ID: W7204155170

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