Work

CyTOF analysis of colonic lamina propria from specific-pathogen-free mice, with or without allergic sensitization

Year: 2026

Type: dataset

Abstract: CyTOF dataset of colonic lamina propria cells from female specific-pathogen-free (SPF) BALB/c mice, with or without allergic sensitization to ovalbumin. metadata.csv contains the fcs file name, the mouse id, the diet (fiber-rich, FR; fiber-free, FF), and treatment (OVA CTX, ovalbumin with choleratoxin adjuvant; CTX, cholera toxin adjuvant control; PBS, phosphate-buffered saline panel.csv describes the marker panel used to stain colonic lamina propria cells Further details can be found in the related publication: Parrish, A., Boudaud, M., Grant, E.T. et al. Akkermansia muciniphila exacerbates food allergy in fibre-deprived mice. Nat Microbiol 8, 1863–1879 (2023). https://doi.org/10.1038/s41564-023-01464-1 Data appears in Extended Data Fig. 5 (heatmap of clustered cell populations) of the above publication. Analysis pipeline (SPF): GitHub - DII-LIH-Luxembourg/amuc-allergy at v1.0 · GitHub

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.22077383

Authors: Parrish, Amy, Boudaud, Marie, Grant, Erica T, Williéme, Stephanie, Neumann, Mareike, Wolter, Mathis, Craig, Sophie Z, De Sciscio, Alessandro, Cosma, Antonio, Hunewald, Oliver, Ollert, Markus W., Desai, Mahesh S

Institutions: Laboratoire National de Santé, Université de Lorraine, Luxembourg Institute of Health, University of Lübeck, University of Southern Denmark, RIKEN Center for Integrative Medical Sciences

Language: English

Topic: Food Allergy and Anaphylaxis Research

Subfield: Immunology and Allergy

Field: Medicine

Domain: Health Sciences

SDG: Good health and well-being

Open Access status: green

OpenAlex ID: W7207614356

Cites:

Cited by: 1

Related to: 10