Work

GDSBM-AMP: model weights and score tables for the AMP Challenge 2027 submission

Year: 2026

Type: software

Abstract: Trained model weights and score tables accompanying the GDSBM-AMP submission to the AMP Challenge (NeurIPS 2026 Competition Track). The generator is a discrete Schrödinger bridge on the Hamming graph, with a DiT head over a frozen ESM-2 650M backbone; only the head weights are distributed, as the backbone is reloaded from the HuggingFace Hub at run time. Also included are the MIC and HC50 score tables for the 50,000-sequence library. Code and full documentation: see the linked GitHub repository. Files are verified by SHA-256 at load time by the submission entry point. See https://github.com/benabdallahabdallah/gdsbm-amp

Source: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.23036466

Authors: Mohsen, Dalal, BenAbdallah, Abdallah

Institutions: Qassim University, University of Sfax

Language: English

Topic: Computational Drug Discovery Methods

Subfield: Drug Discovery

Field: Pharmacology, Toxicology and Pharmaceutics

Domain: Life Sciences

Open Access status: green

OpenAlex ID: W7214765287

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