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Author

Paweł Dudzic

Observed name: Pawel Dudzic
ORCID: 0009-0006-3849-7640
Observed ORCID: 0009-0006-3849-7640
OpenAlex ID: A5009007983
Machine-designed biotherapeutics: opportunities, feasibility and advantages of deep learning in computational antibody discovery
2022 · Wiktoria Wilman, Sonia Wróbel, et al. · Briefings in Bioinformatics · 83
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Structural modeling of antibody variable regions using deep learning—progress and perspectives on drug discovery
2023 · Igor Jaszczyszyn, Weronika Bielska, et al. · Frontiers in Molecular Biosciences · 23
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Applying computational protein design to therapeutic antibody discovery - current state and perspectives
2025 · Weronika Bielska, Igor Jaszczyszyn, et al. · Frontiers in Immunology · 16
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Conserved heavy/light contacts and germline preferences revealed by a large-scale analysis of natively paired human antibody sequences and structural data
2025 · Pawel Dudzic, Dawid Chomicz, et al. · Communications Biology · 15
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AbDesign: database of point mutants of antibodies with associated structures reveals poor generalization of binding predictions from machine learning models
2025 · Bartosz Janusz, Dawid Chomicz, et al. · mAbs · 13
LAP: Liability Antibody Profiler by sequence & structural mapping of natural and therapeutic antibodies
2024 · Tadeusz Satława, Mateusz Tarkowski, et al. · PLoS Computational Biology · 11
RIOT—Rapid Immunoglobulin Overview Tool—annotation of nucleotide and amino acid immunoglobulin sequences using an open germline database
2024 · Paweł Dudzic, Bartosz Janusz, et al. · Briefings in Bioinformatics · 10
Large-scale data mining of four billion human antibody variable regions reveals convergence between therapeutic and natural antibodies that constrains search space for biologics drug discovery
2024 · Pawel Dudzic, Dawid Chomicz, et al. · mAbs · 10
Benchmarking antibody clustering methods using sequence, structural, and machine learning similarity measures for antibody discovery applications
2024 · Dawid Chomicz, Jarosław Kończak, et al. · Frontiers in Molecular Biosciences · 9
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NAStructuralDB : structural database to facilitate computational studies of molecular modeling and recognition of proteins with special focus on antibody–antigen interactions
2026 · Dawid Chomicz, Paweł Dudzic, et al. · mAbs · 5
Structural pre-training improves physical accuracy of antibody structure prediction using deep learning.
2023 · Jarosław Kończak, Bartosz Janusz, et al. · ImmunoInformatics · 5
ASD: antigen-specific antibody database
2026 · Arkadiusz Czerwiński, Paweł Dudzic, et al. · mAbs · 3
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Benchmarking antigen-aware inverse folding methods for antibody design
2026 · Bartosz Janusz, Dawid Chomicz, et al. · Bioinformatics Advances · 2
Herding cats: predicting immunogenicity from heterogeneous clinical trials data
2025 · Pawel Dudzic, Konrad Krawczyk · bioRxiv (Cold Spring Harbor Laboratory) · 2
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nanoFOLD : sequence design of nanobodies via inverse folding
2025 · Dawid Chomicz, Bartosz Janusz, et al. · bioRxiv (Cold Spring Harbor Laboratory) · 1
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Applications of Artificial Intelligence and Machine Learning toward Antibody Discovery and Development
2025 · Anahita Rouyan, Paweł Dudzic, et al. · CRC Press eBooks · 1
Protein Design Viz (PDV): lightweight protein structure visualization studio with validated quantitative analytics and antibody-specific toolkit
2026 · Konrad Krawczyk, Pawel Dudzic, et al. · bioRxiv (Cold Spring Harbor Laboratory)
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Works count: 17
Citation count: 209
H-index: 9
I10-index: 8
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