Author

Fábio Malcher Miranda

Observed names: Fabio Malcher Miranda, Fabio Malcher-Miranda, Fabio Miranda, Fábio M. Miranda, Fábio Malcher Miranda,, Fábio Miranda, Malcher Miranda, Fabio, Miranda, Fábio M.

Institutions: Universidade Federal de Minas Gerais, Hasso Plattner Institute, University of Potsdam, Freie Universität Berlin

Observed institutions: Universidade Federal de Minas Gerais, Hasso Plattner Institute, University of Potsdam, Universidade Federal do Pará, Freie Universität Berlin

ORCID: 0000-0002-6823-5995

Observed ORCID: 0000-0002-6823-5995

OpenAlex ID: A5047727399

Critical Assessment of Metagenome Interpretation: the second round of challenges

2022 · Fernando Meyer, Adrian Fritz, et al. · Nature Methods · 398

Reverse vaccinology and subtractive genomics reveal new therapeutic targets againstMycoplasma pneumoniae: a causative agent of pneumonia

2019 · Thaís Cristina Vilela Rodrigues, Arun Kumar Jaiswal, et al. · Royal Society Open Science · 50

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GapBlaster—A Graphical Gap Filler for Prokaryote Genomes

2016 · Pablo H. C. G. de Sá, Fábio Miranda, et al. · PLoS ONE · 30

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Genome Sequence of Lactococcus lactis subsp. lactis NCDO 2118, a GABA-Producing Strain

2014 · Letícia C. Oliveira, Tessália D. L. Saraiva, et al. · Genome Announcements · 29

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HiClass: a Python library for local hierarchical classification compatible with scikit-learn

2021 · Miranda, Fábio M., Köhnecke, Niklas, et al. · arXiv (Cornell University) · 23

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Characterization of the first vaginal Lactobacillus crispatus genomes isolated in Brazil

2021 · Marcelle Oliveira de Almeida, Rodrigo Carvalho, et al. · PeerJ · 13

Draft genome sequence of Trametes villosa (Sw.) Kreisel CCMB561, a tropical white-rot Basidiomycota from the semiarid region of Brazil

2018 · Dalila Souza Santos Ferreira, Rodrigo Bentes Kato, et al. · Data in Brief · 12

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CovRadar: continuously tracking and filtering SARS-CoV-2 mutations for genomic surveillance

2022 · Alice Wittig, Fábio Miranda, et al. · Bioinformatics · 11

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Comparative genomics ofBordetella pertussisand prediction of new vaccines and drug targets

2021 · Andrei G. Felice, Leonardo N. Q. Santos, et al. · Journal of Biomolecular Structure and Dynamics · 9

Hitac: a hierarchical taxonomic classifier for fungal ITS sequences compatible with QIIME2

2024 · Fábio M. Miranda, Vasco C. Azevedo, et al. · BMC Bioinformatics · 5

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Pan-genomic analyses of 47 complete genomes of theRickettsiagenus and prediction of new vaccine targets and virulence factors of the species

2021 · Andrei G. Felice, Leandro G. Alves, et al. · Journal of Biomolecular Structure and Dynamics · 5

Draft Genome Sequences of Vibrio fluvialis Strains 560 and 539, Isolated from Environmental Samples

2015 · Adonney Allan de Oliveira Veras, Miriam Lopes da Silva, et al. · Genome Announcements · 3

Improving Metagenomic Assemblies Through Data Partitioning: A GC Content Approach

2018 · Fábio Miranda, Cassio Batista, et al. · Lecture notes in computer science · 2

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CovRadar: SARS-CoV-2 spike protein surveillance

2020 · Martin Hölzer, Alice Wittig, et al.

Redundancy Treatment of NGS Contigs in Microbial Genome Finishing with Hashing-Based Approach

2020 · Marcus Braga, Kenny Pinheiro, et al. · Lecture notes in computer science

Redundancy removal from NGS data on microbial genome

2019 · Marcus Braga, Kenny Pinheiro, et al.

Genomic position of drug targets for identification of genomic islands through GIPSY from Reverse vaccinology and subtractive genomics reveal new therapeutic targets against Mycoplasma pneumoniae: a causative agent of pneumonia